pytmosph3r.interface.io

Module Contents

fix_unit_breakage(class_name, attribute)

class Input(filename)

Bases: pytmosph3r.log.Logger

Base class to read input data. HDF5Input and ncInput inherit from it.

filename

f = None

variable = None

open()

close()

keys(path='.')

abstract get(path)

abstract getclass(path: str) → str

abstract getunit(path: str) → astropy.units.Unit | None

read(path, class_obj=None)

Read a class (class_obj) from path in HDF5. The keys in path have to match the class arguments.

Note

If you have parameters to read that are not inputs, you probably want to use a dict as class_obj.

Parameters:

• path (string) – Path to class

• class_obj (Class) – Class to read

class Output(filename, append=False)

Bases: Input

Base class to write outputs. HDF5Output and ncOutput inherit from it.

filename

f = None

group_func = None

Function pointer to the method creating a group

group_class = None

Class pointer to the subclass handling groups

abstract get(path)

abstract getclass(path)

create_group(group_name)

createGroup(group_name)

close()

write_list(list_array, list_name=None, metadata=None)

write_item(item, key=None, metadata=None, to_write='inputs', verbose=False)

write_dictionary(dic)

Recursively write a dictionary into output.

write_obj(obj, to_write='inputs', items=None)

Write an object.

write_output(obj, items=None)

Write outputs.

class Group(f)

Bases: Output, abc.ABC

Base class to write outputs. HDF5Output and ncOutput inherit from it.

f

write_spectrum(output_file='pytmosph3r_spectrum.dat', model=None)

Save a spectrum to a .dat file using a model. The first column lists the wavelengths, the second the value of the flux, the third the noise errorbar, and the fourth the widths of the wavelength edges.